Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTO0136Prenyltransferase. (437 aa)    
Predicted Functional Partners:
PTO1199
Octaprenyl-diphosphate synthase; Farnesyl pyrophosphate synthetase/ geranyltransferase/farnesyltransferase/hexaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.905
PTO0137
Prenyltransferase.
 
  
  0.899
menC
O-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
     
 0.707
PTO0848
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.683
PTO1143
3-hydroxy-3-methylglutaryl-coenzyme A reductase.
   
 
 0.603
fni
Hypothetical isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
   
 
  0.508
PTO1317
Phenylacetic acid degradation protein paaI.
    
 0.402
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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