STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0167Amino acid permease. (444 aa)    
Predicted Functional Partners:
PTO0338
Amino acid permease.
  
     0.606
PTO0784
Transporter.
  
     0.590
PTO0195
Amino acid transporter.
  
     0.564
PTO0139
Amino acid permease.
  
     0.559
PTO0166
Hypothetical membrane spanning protein.
       0.546
PTO0766
Amino acid permease.
  
     0.537
PTO0946
Amino acid transporter.
  
     0.537
PTO0254
Amino acid permease.
  
     0.514
PTO0933
Amino acid permease.
  
     0.493
PTO0844
Amino acid transporter.
  
     0.480
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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