Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTO0178Magnesium-chelatase subunit ChlI. (261 aa)    
Predicted Functional Partners:
PTO0179
CobN protein.
 
 
 0.991
PTO0177
Magnesium-chelatase subunit ChlI.
     0.989
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.912
PTO1434
Decarboxylating precorrin-6Y C5,15-methyltransferase.
  
  
 0.875
PTO0289
Hypothetical protein.
  
 0.873
PTO0180
Extracellular solute-binding protein.
       0.697
PTO0182
Prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
  
 0.628
PTO0176
DNA helicase.
       0.567
PTO1532
Phytoene dehydrogenase.
  
 
 0.521
PTO0174
Dihydroorotate dehydrogenase electron transfer subunit.
       0.505
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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