STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0185Methionine synthase II, cobalamin-independent. (286 aa)    
Predicted Functional Partners:
PTO0186
Methionine synthase II, cobalamin-independent.
    
  0.993
PTO1270
Adenosylhomocysteinase; Belongs to the adenosylhomocysteinase family.
  
 
 0.967
PTO0477
Cystathionine beta-lyase.
  
 
 0.955
PTO1102
Cystathionine gamma-synthase.
  
 
 0.955
mat
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP; Belongs to the AdoMet synthase 2 family.
     
 0.913
PTO0883
Hypothetical protein.
  
 
 0.911
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
 0.905
PTO0897
Ferredoxin.
     
  0.900
PTO0980
Hypothetical phosphodiesterase.
     
  0.900
PTO1417
Homoserine dehydrogenase.
  
 
 0.890
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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