Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTO0192 | PTO0245 | PTO0192 | PTO0245 | Mov34/MPN/PAD-1 family. | single-stranded-DNA-specific exonuclease RecJ. | 0.603 |
PTO0192 | PTO0557 | PTO0192 | PTO0557 | Mov34/MPN/PAD-1 family. | HTH DNA-binding protein. | 0.632 |
PTO0192 | PTO0835 | PTO0192 | PTO0835 | Mov34/MPN/PAD-1 family. | Hypothetical archaea-specific FeS oxidoreductase. | 0.508 |
PTO0192 | PTO0851 | PTO0192 | PTO0851 | Mov34/MPN/PAD-1 family. | Archaeal hypothetical protein; Belongs to the UPF0179 family. | 0.657 |
PTO0192 | atpC | PTO0192 | PTO0492 | Mov34/MPN/PAD-1 family. | A1AO H+ ATPase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.564 |
PTO0192 | mptD | PTO0192 | PTO0218 | Mov34/MPN/PAD-1 family. | Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD). | 0.565 |
PTO0219 | PTO0220 | PTO0219 | PTO0220 | GTPase; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.970 |
PTO0219 | mptD | PTO0219 | PTO0218 | GTPase; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD). | 0.957 |
PTO0220 | PTO0219 | PTO0220 | PTO0219 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | GTPase; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. | 0.970 |
PTO0220 | mptD | PTO0220 | PTO0218 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD). | 0.937 |
PTO0245 | PTO0192 | PTO0245 | PTO0192 | single-stranded-DNA-specific exonuclease RecJ. | Mov34/MPN/PAD-1 family. | 0.603 |
PTO0245 | PTO0557 | PTO0245 | PTO0557 | single-stranded-DNA-specific exonuclease RecJ. | HTH DNA-binding protein. | 0.629 |
PTO0245 | PTO0835 | PTO0245 | PTO0835 | single-stranded-DNA-specific exonuclease RecJ. | Hypothetical archaea-specific FeS oxidoreductase. | 0.434 |
PTO0245 | PTO0851 | PTO0245 | PTO0851 | single-stranded-DNA-specific exonuclease RecJ. | Archaeal hypothetical protein; Belongs to the UPF0179 family. | 0.619 |
PTO0245 | atpC | PTO0245 | PTO0492 | single-stranded-DNA-specific exonuclease RecJ. | A1AO H+ ATPase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.486 |
PTO0245 | mptD | PTO0245 | PTO0218 | single-stranded-DNA-specific exonuclease RecJ. | Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD). | 0.555 |
PTO0551 | mptD | PTO0551 | PTO0218 | Dihydropteroate synthase. | Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD). | 0.938 |
PTO0551 | mptE | PTO0551 | PTO0435 | Dihydropteroate synthase. | Hypothetical protein DUF115; Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl- 7,8-dihydropterin diphosphate (6-HMDP). | 0.937 |
PTO0557 | PTO0192 | PTO0557 | PTO0192 | HTH DNA-binding protein. | Mov34/MPN/PAD-1 family. | 0.632 |
PTO0557 | PTO0245 | PTO0557 | PTO0245 | HTH DNA-binding protein. | single-stranded-DNA-specific exonuclease RecJ. | 0.629 |
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