Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PTO0289Hypothetical protein. (379 aa)    
Predicted Functional Partners:
PTO1434
Decarboxylating precorrin-6Y C5,15-methyltransferase.
 
   
 0.983
PTO0287
Hypothetical protein.
 
  
 0.941
PTO0177
Magnesium-chelatase subunit ChlI.
  
 0.873
PTO0178
Magnesium-chelatase subunit ChlI.
  
 0.873
PTO0288
Putative serine/threonine protein phosphatase.
 
     0.837
PTO0179
CobN protein.
  
 0.713
dnaK
Chaperone protein Dank; Acts as a chaperone.
    
 0.708
PTO1230
MoxR-like ATPase.
 
 
 0.688
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.588
PTO0286
Hypothetical protein.
       0.546
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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