Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trpBTryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (419 aa)    
Predicted Functional Partners:
PTO0345
Tryptophan synthase alpha chain.
   
 0.983
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
  
 
 0.955
trpF
N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
    
 0.872
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
    
 0.848
PTO0342
Anthranilate synthase component I.
     
 0.834
PTO0341
Anthranilate synthase component II.
     
 0.831
PTO0339
Phospho-2-dehydro-3-deoxyheptonate aldolase.
       0.783
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
  0.699
PTO0858
Serine hydroxymethyltransferase.
    
  0.699
PTO0238
Threonine dehydratase.
    
 0.689
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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