Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PTO0397Ferredoxin like protein. (88 aa)    
Predicted Functional Partners:
PTO0398
Electron transfer flavoprotein-quinone oxidoreductase YdiS.
 
 
 0.948
PTO0281
Electron transfer flavoprotein beta-subunit.
  
 0.940
PTO0282
Electron transfer flavoprotein alpha subunit.
  
 0.823
PTO0510
Electron transfer flavoprotein alpha and beta-subunit.
  
 0.783
PTO1383
Electron transfer flavoprotein alpha and beta-subunit.
  
 0.783
PTO1384
FixC protein.
 
 
 0.761
PTO0399
Hypothetical membrane protein.
       0.629
PTO0401
Hypothetical oxidoreductase DUF224.
 
     0.549
PTO0935
Aconitate hydratase.
   
 
 0.503
truD
Conserved hypothetical protein; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
    
   0.483
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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