STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0400Hypothetical peptidase. (572 aa)    
Predicted Functional Partners:
PTO0401
Hypothetical oxidoreductase DUF224.
       0.668
PTO0402
Iron-sulfur cluster-binding protein.
       0.668
PTO0399
Hypothetical membrane protein.
       0.572
PTO0397
Ferredoxin like protein.
       0.473
PTO0398
Electron transfer flavoprotein-quinone oxidoreductase YdiS.
       0.473
PTO0924
Signal peptidase I.
  
 
 0.469
PTO1349
Signal sequence processing protein Sec11 precursor.
  
 
 0.469
PTO1185
Gamma-glutamyltranspeptidase.
  
     0.435
PTO0814
Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
   
 0.408
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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