STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0401Hypothetical oxidoreductase DUF224. (289 aa)    
Predicted Functional Partners:
PTO0402
Iron-sulfur cluster-binding protein.
 
 
 0.967
PTO0281
Electron transfer flavoprotein beta-subunit.
 
 
 0.682
PTO1486
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
  
 
 0.681
PTO0400
Hypothetical peptidase.
       0.668
PTO0282
Electron transfer flavoprotein alpha subunit.
 
 
 0.581
PTO0397
Ferredoxin like protein.
 
     0.549
PTO0399
Hypothetical membrane protein.
       0.500
PTO0997
Succinate dehydrogenase, subunit C.
 
 
 0.500
PTO0146
(S)-2-hydroxy-acid oxidase chain D.
  
 
 0.486
PTO1045
(S)-2-hydroxy-acid oxidase chain D.
  
 
 0.486
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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