STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0426Isocitrate dehydrogenase [NADP]. (355 aa)    
Predicted Functional Partners:
PTO0935
Aconitate hydratase.
  
 0.987
PTO1315
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.933
PTO0168
Isocitrate dehydrogenase [NADP].
  
  
 
0.919
PTO1000
2-oxoglutarate synthase, alpha chain.
  
 
 0.916
PTO1360
Pyruvate ferredoxin oxidoreductase, alpha chain.
  
 
 0.916
PTO0999
2-oxoglutarate synthase, beta chain.
    
 0.912
PTO1361
Pyruvate ferredoxin oxidoreductase, beta chain.
    
 0.912
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily.
  
 
 0.907
PTO1003
succinyl-CoA synthetase beta chain.
  
  
 0.865
PTO1109
Aspartate aminotransferase.
  
 0.854
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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