STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0443PUA domain protein. (151 aa)    
Predicted Functional Partners:
PTO0444
Hypothetical protein.
       0.934
spt5
Hypothetical transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
       0.934
PTO0446
Predicted protein translocase subunit Sss1.
       0.931
PTO1241
Ribonucleoside-diphosphate reductase alpha chain; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.882
rps4e
Small subunit ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family.
    
   0.763
rps3
Small subunit ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
    
   0.751
PTO0442
Hypothetical bacterioferritin comigratory protein.
       0.718
rps2
Small subunit ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
  
   0.706
rps17
Small subunit ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
 
   0.691
rps19
Small subunit ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
    
   0.687
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.