Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTO0465Orotate phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (195 aa)    
Predicted Functional Partners:
lysS
lysyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.922
PTO0464
Asymmetrical bis(5'-nucleosyl)-tetraphosphatase.
       0.805
PTO0520
Zinc finger protein.
 
     0.729
PTO0273
Hypothetical membrane spanning protein.
  
     0.673
PTO1287
Transcriptional regulator.
  
     0.659
PTO0724
Archaeosine tRNA-ribosyltransferase.
  
     0.632
PTO0835
Hypothetical archaea-specific FeS oxidoreductase.
  
     0.632
PTO0851
Archaeal hypothetical protein; Belongs to the UPF0179 family.
  
     0.625
PTO0210
Orotidine 5'-phosphate decarboxylase.
  
  
 0.624
PTO0265
Molybdenum cofactor biosynthesis protein A.
  
     0.624
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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