STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0477Cystathionine beta-lyase. (364 aa)    
Predicted Functional Partners:
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.989
PTO0151
Cysteine synthase.
 
 0.973
PTO0953
Cysteine synthase.
  
 0.970
PTO0185
Methionine synthase II, cobalamin-independent.
  
 
 0.955
PTO0186
Methionine synthase II, cobalamin-independent.
  
 
 0.955
PTO1270
Adenosylhomocysteinase; Belongs to the adenosylhomocysteinase family.
  
 0.937
PTO1417
Homoserine dehydrogenase.
 
 
 0.918
PTO0539
Sulfide-quinone oxidoreductase.
  
 
 0.908
PTO1227
Sulfide dehydrogenase (flavocytochrome C).
  
 
 0.908
PTO1102
Cystathionine gamma-synthase.
  
  
 
0.906
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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