Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTO0499Terminal quinol oxidase, subunit I. (190 aa)    
Predicted Functional Partners:
PTO0500
Terminal quinol oxidase, subunit II.
    
 0.963
PTO0209
Membrane associated serine protease.
  
     0.542
PTO0073
Transporter.
  
     0.523
PTO0886
Hypothetical exported protein (PQQ-dependent).
  
  
 0.522
PTO1278
Transporter.
  
     0.509
PTO1018
Quinoprotein dehydrogenase.
  
  
 0.461
PTO0552
Transporter.
  
     0.434
PTO1145
Putative multidrug resistance protein.
  
     0.428
PTO0060
Conserved hypothetical protein.
  
     0.418
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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