Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTO0576Transcriptional regulator. (363 aa)    
Predicted Functional Partners:
PTO0577
Hypothetical protein.
 
   
 0.739
PTO0578
Putative maltose phosphorylase.
 
   
 0.738
PTO0685
Oligopeptide ABC transporter Opp1, extracellular binding protein.
  
   
 0.700
PTO0018
Extracellular solute-binding protein.
  
   
 0.695
PTO0796
Hypothetical efflux protein.
  
     0.685
PTO0180
Extracellular solute-binding protein.
  
   
 0.676
PTO1050
Subtilase family protein.
 
     0.676
PTO0478
Diphosphomevalonate decarboxylase; Catalyzes the ATP-independent decarboxylation of (R)- mevalonate 3,5-bisphosphate to isopentenyl phosphate. Functions in an alternative mevalonate pathway, only present in extreme acidophiles of the Thermoplasmatales order, which passes through mevalonate 3- phosphate rather than mevalonate 5-phosphate. Shows no detectable decarboxylase activity on mevalonate, mevalonate 3-phosphate, mevalonate 5-phosphate or mevalonate 5-pyrophosphate.
  
     0.590
PTO1350
Transporter.
  
     0.587
PTO0575
Carboxypeptidase G2 precursor.
       0.561
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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