Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PTO0374 | PTO0614 | PTO0374 | PTO0614 | O-sialoglycoprotein endopeptidase/protein kinase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the C-terminal section; belongs to the protein kinase superfamily. Tyr prot [...] | Hypothetical membrane associated protein. | 0.766 |
| PTO0374 | dnaG | PTO0374 | PTO0617 | O-sialoglycoprotein endopeptidase/protein kinase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the C-terminal section; belongs to the protein kinase superfamily. Tyr prot [...] | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.942 |
| PTO0614 | PTO0374 | PTO0614 | PTO0374 | Hypothetical membrane associated protein. | O-sialoglycoprotein endopeptidase/protein kinase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the C-terminal section; belongs to the protein kinase superfamily. Tyr prot [...] | 0.766 |
| PTO0614 | PTO0615 | PTO0614 | PTO0615 | Hypothetical membrane associated protein. | Hypothetical protein. | 0.666 |
| PTO0614 | PTO0616 | PTO0614 | PTO0616 | Hypothetical membrane associated protein. | Endonuclease IV. | 0.666 |
| PTO0614 | PTO0618 | PTO0614 | PTO0618 | Hypothetical membrane associated protein. | Putative protease La homolog type 2. | 0.445 |
| PTO0614 | dnaG | PTO0614 | PTO0617 | Hypothetical membrane associated protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.445 |
| PTO0615 | PTO0614 | PTO0615 | PTO0614 | Hypothetical protein. | Hypothetical membrane associated protein. | 0.666 |
| PTO0615 | PTO0616 | PTO0615 | PTO0616 | Hypothetical protein. | Endonuclease IV. | 0.934 |
| PTO0615 | PTO0618 | PTO0615 | PTO0618 | Hypothetical protein. | Putative protease La homolog type 2. | 0.536 |
| PTO0615 | dnaG | PTO0615 | PTO0617 | Hypothetical protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.536 |
| PTO0616 | PTO0614 | PTO0616 | PTO0614 | Endonuclease IV. | Hypothetical membrane associated protein. | 0.666 |
| PTO0616 | PTO0615 | PTO0616 | PTO0615 | Endonuclease IV. | Hypothetical protein. | 0.934 |
| PTO0616 | PTO0618 | PTO0616 | PTO0618 | Endonuclease IV. | Putative protease La homolog type 2. | 0.794 |
| PTO0616 | dnaG | PTO0616 | PTO0617 | Endonuclease IV. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.639 |
| PTO0618 | PTO0614 | PTO0618 | PTO0614 | Putative protease La homolog type 2. | Hypothetical membrane associated protein. | 0.445 |
| PTO0618 | PTO0615 | PTO0618 | PTO0615 | Putative protease La homolog type 2. | Hypothetical protein. | 0.536 |
| PTO0618 | PTO0616 | PTO0618 | PTO0616 | Putative protease La homolog type 2. | Endonuclease IV. | 0.794 |
| PTO0618 | dnaG | PTO0618 | PTO0617 | Putative protease La homolog type 2. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.972 |
| dnaG | PTO0374 | PTO0617 | PTO0374 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | O-sialoglycoprotein endopeptidase/protein kinase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the C-terminal section; belongs to the protein kinase superfamily. Tyr prot [...] | 0.942 |
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