Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PTO0251 | PTO0259 | PTO0251 | PTO0259 | Putative RNA-binding protein; Contains S1 and KH domains. | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.409 |
| PTO0251 | eif1a | PTO0251 | PTO0253 | Putative RNA-binding protein; Contains S1 and KH domains. | Protein translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.988 |
| PTO0251 | rpl13 | PTO0251 | PTO0323 | Putative RNA-binding protein; Contains S1 and KH domains. | Large subunit ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.420 |
| PTO0251 | rpl18e | PTO0251 | PTO0322 | Putative RNA-binding protein; Contains S1 and KH domains. | Large subunit ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family. | 0.651 |
| PTO0251 | rpl21e | PTO0251 | PTO0389 | Putative RNA-binding protein; Contains S1 and KH domains. | Large subunit ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.635 |
| PTO0251 | rpl31e | PTO0251 | PTO0206 | Putative RNA-binding protein; Contains S1 and KH domains. | Large subunit ribosomal protein L31E; Belongs to the eukaryotic ribosomal protein eL31 family. | 0.452 |
| PTO0251 | rps15 | PTO0251 | PTO0244 | Putative RNA-binding protein; Contains S1 and KH domains. | Small subunit ribosomal protein S15P. | 0.998 |
| PTO0251 | rps19e | PTO0251 | PTO0203 | Putative RNA-binding protein; Contains S1 and KH domains. | Small subunit ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. | 0.794 |
| PTO0251 | rps3 | PTO0251 | PTO0646 | Putative RNA-binding protein; Contains S1 and KH domains. | Small subunit ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| PTO0251 | rps9 | PTO0251 | PTO0324 | Putative RNA-binding protein; Contains S1 and KH domains. | Small subunit ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.987 |
| PTO0259 | PTO0251 | PTO0259 | PTO0251 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Putative RNA-binding protein; Contains S1 and KH domains. | 0.409 |
| PTO0259 | eif1a | PTO0259 | PTO0253 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Protein translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.931 |
| PTO0259 | rpl13 | PTO0259 | PTO0323 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Large subunit ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.979 |
| PTO0259 | rps15 | PTO0259 | PTO0244 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Small subunit ribosomal protein S15P. | 0.968 |
| PTO0259 | rps19e | PTO0259 | PTO0203 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Small subunit ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. | 0.458 |
| PTO0259 | rps3 | PTO0259 | PTO0646 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Small subunit ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| PTO0259 | rps9 | PTO0259 | PTO0324 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Small subunit ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
| eif1a | PTO0251 | PTO0253 | PTO0251 | Protein translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Putative RNA-binding protein; Contains S1 and KH domains. | 0.988 |
| eif1a | PTO0259 | PTO0253 | PTO0259 | Protein translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.931 |
| eif1a | rpl13 | PTO0253 | PTO0323 | Protein translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Large subunit ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.945 |
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