Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PTO0680Met-10+ protein. (325 aa)    
Predicted Functional Partners:
taw1
Fe-S oxidoreductase; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe).
  
  
 0.870
pus10
Hypothetical conserved protein; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs.
  
  
 0.793
PTO1421
NMD protein affecting ribosome stability and mRNA decay.
  
    0.720
PTO0429
Hypothetical oxidoreductase.
  
  
 0.603
PTO0679
Molybdopterin-guanine dinucleotide biosynthesis protein B.
 
     0.583
PTO0681
Oligopeptide ABC transporter Opp1, permease protein.
       0.580
PTO0682
Oligopeptide ABC transporter Opp1, permease protein.
       0.580
PTO0683
Oligopeptide ABC transporter Opp1, ATP binding protein.
       0.580
PTO0684
Hypothetical transmembrane protein.
       0.580
PTO1140
DNA/pantothenate metabolism flavoprotein.
  
    0.555
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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