Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTO0683Oligopeptide ABC transporter Opp1, ATP binding protein. (720 aa)    
Predicted Functional Partners:
PTO0216
Dipeptide ABC transporter Dpp1, permease protein.
 0.996
PTO0681
Oligopeptide ABC transporter Opp1, permease protein.
 
 0.996
PTO0682
Oligopeptide ABC transporter Opp1, permease protein.
 
 0.993
PTO1449
Oligopeptide ABC transporter Opp2, permease protein.
 0.987
PTO0217
Dipeptide ABC transporter Dpp1, permease protein.
 0.928
PTO1448
Oligopeptide ABC transporter Opp2, permease protein.
 0.910
PTO0684
Hypothetical transmembrane protein.
       0.866
PTO0765
Oligopeptide ABC transporter Dpp1, ATP binding protein.
 
 
0.865
PTO0215
Dipeptide ABC transporter Dpp1, ATP binding protein.
  
 
 0.844
PTO0685
Oligopeptide ABC transporter Opp1, extracellular binding protein.
 
 0.844
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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