STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0683Oligopeptide ABC transporter Opp1, ATP binding protein. (720 aa)    
Predicted Functional Partners:
PTO0682
Oligopeptide ABC transporter Opp1, permease protein.
 
  
 0.987
PTO0216
Dipeptide ABC transporter Dpp1, permease protein.
  
 0.985
PTO0681
Oligopeptide ABC transporter Opp1, permease protein.
  
 0.973
PTO1449
Oligopeptide ABC transporter Opp2, permease protein.
  
 0.964
PTO0684
Hypothetical transmembrane protein.
       0.934
PTO0217
Dipeptide ABC transporter Dpp1, permease protein.
  
 0.862
PTO1448
Oligopeptide ABC transporter Opp2, permease protein.
  
 0.828
PTO0765
Oligopeptide ABC transporter Dpp1, ATP binding protein.
 
  
0.747
PTO0215
Dipeptide ABC transporter Dpp1, ATP binding protein.
 
  
0.728
PTO1429
O6-methylguanine-DNA methyltransferase/endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA (By similarity); In the N-terminal section; belongs to the MGMT family.
       0.728
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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