Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTO0192 | PTO0456 | PTO0192 | PTO0456 | Mov34/MPN/PAD-1 family. | Cell division cycle protein 48. | 0.652 |
PTO0192 | PTO1484 | PTO0192 | PTO1484 | Mov34/MPN/PAD-1 family. | Glycerol kinase. | 0.999 |
PTO0192 | ef1b | PTO0192 | PTO1164 | Mov34/MPN/PAD-1 family. | Archaeal protein translation elongation factor 1 subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | 0.425 |
PTO0192 | psmA | PTO0192 | PTO0804 | Mov34/MPN/PAD-1 family. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.928 |
PTO0192 | psmB | PTO0192 | PTO0686 | Mov34/MPN/PAD-1 family. | Proteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.928 |
PTO0192 | rpl7ae | PTO0192 | PTO1280 | Mov34/MPN/PAD-1 family. | Small subunit ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.912 |
PTO0456 | PTO0192 | PTO0456 | PTO0192 | Cell division cycle protein 48. | Mov34/MPN/PAD-1 family. | 0.652 |
PTO0456 | PTO0735 | PTO0456 | PTO0735 | Cell division cycle protein 48. | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | 0.551 |
PTO0456 | PTO1195 | PTO0456 | PTO1195 | Cell division cycle protein 48. | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | 0.540 |
PTO0456 | PTO1484 | PTO0456 | PTO1484 | Cell division cycle protein 48. | Glycerol kinase. | 0.788 |
PTO0456 | psmA | PTO0456 | PTO0804 | Cell division cycle protein 48. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.740 |
PTO0456 | psmB | PTO0456 | PTO0686 | Cell division cycle protein 48. | Proteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.735 |
PTO0456 | rpl7ae | PTO0456 | PTO1280 | Cell division cycle protein 48. | Small subunit ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.513 |
PTO0687 | PTO0688 | PTO0687 | PTO0688 | Cleavage and polyadenylation specificity factor, 100 kDa subunit. | Hypothetical exported protein. | 0.658 |
PTO0687 | psmB | PTO0687 | PTO0686 | Cleavage and polyadenylation specificity factor, 100 kDa subunit. | Proteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.932 |
PTO0688 | PTO0687 | PTO0688 | PTO0687 | Hypothetical exported protein. | Cleavage and polyadenylation specificity factor, 100 kDa subunit. | 0.658 |
PTO0688 | psmB | PTO0688 | PTO0686 | Hypothetical exported protein. | Proteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.577 |
PTO0735 | PTO0456 | PTO0735 | PTO0456 | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | Cell division cycle protein 48. | 0.551 |
PTO0735 | PTO1195 | PTO0735 | PTO1195 | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | 0.999 |
PTO0735 | psmA | PTO0735 | PTO0804 | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.745 |
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