Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PTO0706Oligopeptide ABC transporter Dpp2, permease protein. (247 aa)    
Predicted Functional Partners:
PTO0705
Oligopeptide ABC transporter Dpp2, permease protein.
  
 0.942
PTO0707
Hypothetical protein.
  
 0.920
PTO0683
Oligopeptide ABC transporter Opp1, ATP binding protein.
  
 0.804
PTO0217
Dipeptide ABC transporter Dpp1, permease protein.
  
 0.755
PTO0681
Oligopeptide ABC transporter Opp1, permease protein.
  
 0.755
PTO1448
Oligopeptide ABC transporter Opp2, permease protein.
  
 0.755
PTO0708
Oligopeptide ABC transporter Dpp1, extracellular binding protein.
  
 0.727
PTO0181
Extracellular solute-binding protein.
  
 0.675
PTO1178
ABC transporter extracellular solute-binding protein.
  
 0.675
PTO1447
Oligopeptide ABC transporter Opp2, extracellular binding protein.
  
 0.675
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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