Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PTO0708Oligopeptide ABC transporter Dpp1, extracellular binding protein. (930 aa)    
Predicted Functional Partners:
PTO0216
Dipeptide ABC transporter Dpp1, permease protein.
  
 0.945
PTO0765
Oligopeptide ABC transporter Dpp1, ATP binding protein.
  
 0.917
PTO0214
Dipeptide ABC transporter Dpp1, ATP binding protein.
 
 0.885
PTO0215
Dipeptide ABC transporter Dpp1, ATP binding protein.
  
 0.859
PTO0681
Oligopeptide ABC transporter Opp1, permease protein.
  
 0.839
PTO0682
Oligopeptide ABC transporter Opp1, permease protein.
  
 0.834
PTO1449
Oligopeptide ABC transporter Opp2, permease protein.
  
 0.812
PTO0705
Oligopeptide ABC transporter Dpp2, permease protein.
 
 0.808
PTO0683
Oligopeptide ABC transporter Opp1, ATP binding protein.
  
 0.781
PTO0706
Oligopeptide ABC transporter Dpp2, permease protein.
  
 0.727
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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