| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PTO0251 | csl4 | PTO0251 | PTO0723 | Putative RNA-binding protein; Contains S1 and KH domains. | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.912 |
| PTO0251 | dnaG | PTO0251 | PTO0617 | Putative RNA-binding protein; Contains S1 and KH domains. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.639 |
| PTO0251 | nep1 | PTO0251 | PTO0697 | Putative RNA-binding protein; Contains S1 and KH domains. | Multicopy suppressor of ras1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. | 0.981 |
| PTO0251 | rpl7ae | PTO0251 | PTO1280 | Putative RNA-binding protein; Contains S1 and KH domains. | Small subunit ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.898 |
| PTO0251 | rps11 | PTO0251 | PTO1221 | Putative RNA-binding protein; Contains S1 and KH domains. | Small subunit ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.960 |
| PTO0251 | rps4 | PTO0251 | PTO1220 | Putative RNA-binding protein; Contains S1 and KH domains. | Small subunit ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.972 |
| PTO0251 | rps6e | PTO0251 | PTO0591 | Putative RNA-binding protein; Contains S1 and KH domains. | Small subunit ribosomal protein S6E; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.966 |
| PTO0251 | rrp4 | PTO0251 | PTO0395 | Putative RNA-binding protein; Contains S1 and KH domains. | 3'->5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.895 |
| PTO0251 | rrp41 | PTO0251 | PTO0394 | Putative RNA-binding protein; Contains S1 and KH domains. | Ribonuclease PH; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.832 |
| PTO0251 | rrp42 | PTO0251 | PTO0393 | Putative RNA-binding protein; Contains S1 and KH domains. | Ribonuclease PH; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.868 |
| csl4 | PTO0251 | PTO0723 | PTO0251 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Putative RNA-binding protein; Contains S1 and KH domains. | 0.912 |
| csl4 | dnaG | PTO0723 | PTO0617 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.958 |
| csl4 | nep1 | PTO0723 | PTO0697 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Multicopy suppressor of ras1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. | 0.919 |
| csl4 | rpl7ae | PTO0723 | PTO1280 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Small subunit ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.910 |
| csl4 | rps11 | PTO0723 | PTO1221 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Small subunit ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.919 |
| csl4 | rps4 | PTO0723 | PTO1220 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Small subunit ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.938 |
| csl4 | rps6e | PTO0723 | PTO0591 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Small subunit ribosomal protein S6E; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.922 |
| csl4 | rrp4 | PTO0723 | PTO0395 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 3'->5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.996 |
| csl4 | rrp41 | PTO0723 | PTO0394 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Ribonuclease PH; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.997 |
| csl4 | rrp42 | PTO0723 | PTO0393 | Putative RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Ribonuclease PH; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.998 |
