Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTO0725Hypothetical metal-dependent hydrolase. (412 aa)    
Predicted Functional Partners:
PTO0942
5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
 
 
 0.982
PTO1270
Adenosylhomocysteinase; Belongs to the adenosylhomocysteinase family.
 
 
 0.970
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
   
 0.911
PTO0385
Band 7 integral membrane protein-like protein.
      0.796
PTO0123
Purine nucleoside phosphorylase.
    
 0.716
PTO1337
ATP phosphoribosyltransferase.
  
    0.684
PTO0724
Archaeosine tRNA-ribosyltransferase.
       0.676
hutI
Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 
 0.625
PTO0131
Allantoin permease family protein.
 
  
 0.585
PTO1341
protein-L-isoaspartate O-methyltransferase.
  
  
  0.547
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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