Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTO0232 | PTO0336 | PTO0232 | PTO0336 | Pantothenate kinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.401 |
PTO0232 | PTO0348 | PTO0232 | PTO0348 | Pantothenate kinase. | Triosephosphate isomerase; Belongs to the HisA/HisF family. | 0.542 |
PTO0232 | gap | PTO0232 | PTO0742 | Pantothenate kinase. | Glyceraldehyde 3-phosphate dehydrogenase. | 0.961 |
PTO0232 | pgk | PTO0232 | PTO1514 | Pantothenate kinase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.676 |
PTO0336 | PTO0232 | PTO0336 | PTO0232 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pantothenate kinase. | 0.401 |
PTO0336 | PTO0348 | PTO0336 | PTO0348 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Triosephosphate isomerase; Belongs to the HisA/HisF family. | 0.861 |
PTO0336 | PTO1226 | PTO0336 | PTO1226 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glucose/mannose-6-phosphate isomerase. | 0.972 |
PTO0336 | eno | PTO0336 | PTO1234 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.994 |
PTO0336 | fbp | PTO0336 | PTO0807 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Dihydroorotate dehydrogenase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | 0.822 |
PTO0336 | gap | PTO0336 | PTO0742 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glyceraldehyde 3-phosphate dehydrogenase. | 0.908 |
PTO0336 | mdh | PTO0336 | PTO0994 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. | 0.731 |
PTO0336 | pgk | PTO0336 | PTO1514 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.912 |
PTO0336 | tal | PTO0336 | PTO0689 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.880 |
PTO0348 | PTO0232 | PTO0348 | PTO0232 | Triosephosphate isomerase; Belongs to the HisA/HisF family. | Pantothenate kinase. | 0.542 |
PTO0348 | PTO0336 | PTO0348 | PTO0336 | Triosephosphate isomerase; Belongs to the HisA/HisF family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.861 |
PTO0348 | PTO1226 | PTO0348 | PTO1226 | Triosephosphate isomerase; Belongs to the HisA/HisF family. | Glucose/mannose-6-phosphate isomerase. | 0.998 |
PTO0348 | eno | PTO0348 | PTO1234 | Triosephosphate isomerase; Belongs to the HisA/HisF family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.999 |
PTO0348 | fbp | PTO0348 | PTO0807 | Triosephosphate isomerase; Belongs to the HisA/HisF family. | Dihydroorotate dehydrogenase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | 0.988 |
PTO0348 | gap | PTO0348 | PTO0742 | Triosephosphate isomerase; Belongs to the HisA/HisF family. | Glyceraldehyde 3-phosphate dehydrogenase. | 0.999 |
PTO0348 | mdh | PTO0348 | PTO0994 | Triosephosphate isomerase; Belongs to the HisA/HisF family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. | 0.733 |
page 1 of 5