STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0764Oligopeptide ABC transporter Dpp1, ATP binding protein. (238 aa)    
Predicted Functional Partners:
PTO0215
Dipeptide ABC transporter Dpp1, ATP binding protein.
  
0.945
PTO0765
Oligopeptide ABC transporter Dpp1, ATP binding protein.
 
  
0.881
PTO0766
Amino acid permease.
       0.773
PTO0682
Oligopeptide ABC transporter Opp1, permease protein.
 
  
 0.615
PTO1449
Oligopeptide ABC transporter Opp2, permease protein.
  
 0.608
rpl2
Large subunit ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
     0.600
PTO0216
Dipeptide ABC transporter Dpp1, permease protein.
 
  
 0.595
PTO0977
Multidrug resistance ABC transporter ATP-binding and permease protein.
  
     0.535
PTO0706
Oligopeptide ABC transporter Dpp2, permease protein.
  
  
 0.509
tuf
Protein translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
  
     0.482
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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