STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0793acyl-CoA hydrolase. (163 aa)    
Predicted Functional Partners:
PTO0792
Hypothetical hjc gene.
       0.774
PTO0954
enoyl-CoA hydratase/isomerase family.
  
 0.625
PTO1317
Phenylacetic acid degradation protein paaI.
  
 
 0.513
PTO0547
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.485
PTO1021
3-hydroxybutyryl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase.
  
 
 0.445
PTO1504
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.445
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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