Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PTO0824Oxidoreductase. (571 aa)    
Predicted Functional Partners:
PTO0829
Formate hydrogenlyase subunit 4.
 
 0.996
PTO0825
Formate hydrogenlyase subunit 7.
 
 0.995
PTO0826
Formate hydrogenlyase subunit 5.
 
 0.993
PTO0930
NADH-quinone oxidoreductase chain L.
 
 0.955
PTO0828
Hypothetical membrane protein.
  
 
 0.934
PTO1029
NADH-quinone oxidoreductase chain L.
 
0.913
PTO0827
Formate hydrogenlyase subunit 3.
 
    
0.872
PTO1405
NADH-quinone oxidoreductase chain I.
  
 0.843
PTO1409
NADH-quinone oxidoreductase chain N.
 
 
  0.836
PTO1028
NADH-quinone oxidoreductase chain M.
 
 
  0.789
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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