STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0835Hypothetical archaea-specific FeS oxidoreductase. (352 aa)    
Predicted Functional Partners:
PTO0724
Archaeosine tRNA-ribosyltransferase.
 
     0.799
PTO0851
Archaeal hypothetical protein; Belongs to the UPF0179 family.
  
     0.685
PTO0265
Molybdenum cofactor biosynthesis protein A.
  
     0.661
PTO0700
Hypothetical phosphoserine phosphatase.
  
     0.639
PTO1418
Hypothetical protein.
  
     0.638
PTO1421
NMD protein affecting ribosome stability and mRNA decay.
  
     0.636
PTO0557
HTH DNA-binding protein.
  
     0.633
PTO0465
Orotate phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
     0.632
PTO1419
Replication factor-A protein 1.
  
     0.628
PTO0703
Hypothetical ribosomal protein.
  
     0.622
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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