STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0835Hypothetical archaea-specific FeS oxidoreductase. (352 aa)    
Predicted Functional Partners:
PTO0724
Archaeosine tRNA-ribosyltransferase.
 
     0.856
surE
Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
 
     0.735
PTO0851
Archaeal hypothetical protein; Belongs to the UPF0179 family.
  
     0.685
guaAB
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
       0.684
PTO0615
Hypothetical protein.
       0.665
PTO0265
Molybdenum cofactor biosynthesis protein A.
  
     0.661
PTO0700
Hypothetical phosphoserine phosphatase.
  
     0.639
PTO1418
Hypothetical protein.
  
     0.638
PTO1421
NMD protein affecting ribosome stability and mRNA decay.
  
     0.636
PTO0557
HTH DNA-binding protein.
  
     0.633
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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