Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PTO0855Transposase. (104 aa)    
Predicted Functional Partners:
smc
Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.449
PTO0857
Hypothetical protein.
       0.449
PTO0859
Inosine-5'-monophosphate dehydrogenase.
       0.419
PTO0858
Serine hydroxymethyltransferase.
       0.410
PTO0860
Zinc metalloprotease; Similar to TldD/PmbA.
       0.410
PTO0861
PmbA protein.
       0.410
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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