PTO0880 protein (Picrophilus torridus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PTO0880

ATP-dependent helicase. (1667 aa)

Predicted Functional Partners:

gltX

0.783

PTO1098

0.719

PTO0879

0.655

PTO0877

0.589

PTO0881

0.548

PTO0882

0.548

PTO0199

0.480

PTO0618

0.432

PTO0883

0.414

PTO0884

0.410

Your Current Organism:

Picrophilus torridus

NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTO0199	PTO0880	PTO0199	PTO0880	Archaeal hypothetical cytosolic protein; Belongs to the UPF0147 family.	ATP-dependent helicase.	0.480
PTO0199	PTO1098	PTO0199	PTO1098	Archaeal hypothetical cytosolic protein; Belongs to the UPF0147 family.	Putative ICC-like phosphoesterases.	0.500
PTO0199	gltX	PTO0199	PTO0878	Archaeal hypothetical cytosolic protein; Belongs to the UPF0147 family.	glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).	0.407
PTO0618	PTO0880	PTO0618	PTO0880	Putative protease La homolog type 2.	ATP-dependent helicase.	0.432
PTO0618	gltX	PTO0618	PTO0878	Putative protease La homolog type 2.	glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).	0.456
PTO0877	PTO0879	PTO0877	PTO0879	Hypothetical protein.	GTP-binding protein.	0.693
PTO0877	PTO0880	PTO0877	PTO0880	Hypothetical protein.	ATP-dependent helicase.	0.589
PTO0877	PTO0881	PTO0877	PTO0881	Hypothetical protein.	Hypothetical aldo/keto reductase.	0.429
PTO0877	PTO0882	PTO0877	PTO0882	Hypothetical protein.	Hypothetical membrane protein.	0.429
PTO0877	gltX	PTO0877	PTO0878	Hypothetical protein.	glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).	0.693
PTO0879	PTO0877	PTO0879	PTO0877	GTP-binding protein.	Hypothetical protein.	0.693
PTO0879	PTO0880	PTO0879	PTO0880	GTP-binding protein.	ATP-dependent helicase.	0.655
PTO0879	PTO0881	PTO0879	PTO0881	GTP-binding protein.	Hypothetical aldo/keto reductase.	0.471
PTO0879	PTO0882	PTO0879	PTO0882	GTP-binding protein.	Hypothetical membrane protein.	0.471
PTO0879	gltX	PTO0879	PTO0878	GTP-binding protein.	glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).	0.967
PTO0880	PTO0199	PTO0880	PTO0199	ATP-dependent helicase.	Archaeal hypothetical cytosolic protein; Belongs to the UPF0147 family.	0.480
PTO0880	PTO0618	PTO0880	PTO0618	ATP-dependent helicase.	Putative protease La homolog type 2.	0.432
PTO0880	PTO0877	PTO0880	PTO0877	ATP-dependent helicase.	Hypothetical protein.	0.589
PTO0880	PTO0879	PTO0880	PTO0879	ATP-dependent helicase.	GTP-binding protein.	0.655
PTO0880	PTO0881	PTO0880	PTO0881	ATP-dependent helicase.	Hypothetical aldo/keto reductase.	0.548

page 1 of 3

Server load: medium (46%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About