STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0908Conserved archael protein; Contains ACT-Domain. (170 aa)    
Predicted Functional Partners:
PTO0909
Hypothetical archaeal protein.
       0.665
PTO0851
Archaeal hypothetical protein; Belongs to the UPF0179 family.
  
     0.662
PTO0703
Hypothetical ribosomal protein.
  
     0.652
PTO0907
Gluconolactonase.
       0.648
PTO0192
Mov34/MPN/PAD-1 family.
  
     0.626
rps27e
Small subunit ribosomal protein S27E.
  
     0.624
PTO0905
Hypothetical protein; Conserved in archaea; Belongs to the UPF0215 family.
 
     0.608
PTO0906
Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
     0.607
PTO0724
Archaeosine tRNA-ribosyltransferase.
 
     0.599
tiaS
Hypothetical protein; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
  
     0.584
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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