STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0939Mannose-6-phosphate isomerase. (125 aa)    
Predicted Functional Partners:
PTO0791
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.682
PTO0940
Hypothetical membrane protein.
       0.668
PTO0938
Sulfite dehydrogenase.
     
 0.637
PTO0937
Hypothetical transporter.
       0.569
PTO0941
Hypothetical aldo-keto reductase.
       0.533
PTO1069
DNA-binding protein.
     
 0.523
PTO1108
Phosphoglycolate phosphatase.
 
    0.468
PTO0163
Transporter.
 
  
 0.448
PTO1013
Prephenate dehydratase.
  
  
 0.411
PTO1368
Aspartokinase.
     
 0.411
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.