STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0958Hypothetical conserved protein DUF52; Belongs to the MEMO1 family. (268 aa)    
Predicted Functional Partners:
PTO0955
Conserved hypothetical protein DUF51.
    0.993
PTO0959
Pyruvate formate-lyase activating enzyme.
     0.988
PTO0957
Malate oxidoreductase.
       0.545
PTO0956
Acetyltransferase.
  
    0.527
PTO0519
Hypothetical protein.
   
  0.494
PTO0620
ATP (GTP)-binding protein.
   
  0.494
PTO0954
enoyl-CoA hydratase/isomerase family.
  
    0.451
fni
Hypothetical isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
    0.436
rps9
Small subunit ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
  
    0.413
rps2
Small subunit ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
  
    0.412
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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