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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0979Iron-dependent repressor. (131 aa)    
Predicted Functional Partners:
PTO0980
Hypothetical phosphodiesterase.
       0.698
PTO0978
Hypothetical protein.
       0.671
priL
DNA primase 58 kDa subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.
       0.624
PTO0981
Xaa-Pro dipeptidase; Belongs to the peptidase M24B family.
       0.617
PTO0825
Formate hydrogenlyase subunit 7.
    
   0.576
PTO0917
ABC transporter ATP-binding protein.
 
  
 0.541
PTO0976
Multidrug resistance ABC transporter ATP-binding and permease protein.
     
 0.436
PTO0977
Multidrug resistance ABC transporter ATP-binding and permease protein.
     
 0.436
PTO1162
Transporter.
  
  
 0.412
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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