Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTO0987Na(+)/H(+) antiporter. (425 aa)    
Predicted Functional Partners:
PTO1482
E1-E2 ATPase.
   
 0.894
nadE
NAD synthase related protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.866
PTO0494
A1AO H+ ATPase subunit K.
   
 0.813
atpC
A1AO H+ ATPase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.805
smc
Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
 0.800
PTO0486
A1AO H+ ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
   
 
 0.796
atpA
A1AO H+ ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
     
 0.785
atpB
A1AO H+ ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
     
 0.783
atpD
A1AO H+ ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
     
 0.761
PTO0491
A1AO H+ ATPase subunit F.
     
  0.759
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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