STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0997Succinate dehydrogenase, subunit C. (290 aa)    
Predicted Functional Partners:
PTO0995
Succinate dehydrogenase flavoprotein subunit.
 
 
 0.982
PTO0996
Succinate dehydrogenase iron-sulfur protein.
 
  
 0.969
PTO1039
Formate dehydrogenase alpha chain.
   
 0.951
PTO0998
Succinate dehydrogenase, subunit D.
    
 0.949
PTO1486
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
 
  
 0.874
PTO0147
(S)-2-hydroxy-acid oxidase, iron-sulfur chain.
 
 
 0.851
sucD
succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
  0.839
PTO1003
succinyl-CoA synthetase beta chain.
    
  0.837
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily.
     
 0.767
PTO0174
Dihydroorotate dehydrogenase electron transfer subunit.
 
  
 0.698
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.