Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PTO1012 | PTO1013 | PTO1012 | PTO1013 | Lactate 2-monooxygenase. | Prephenate dehydratase. | 0.615 |
| PTO1012 | PTO1014 | PTO1012 | PTO1014 | Lactate 2-monooxygenase. | Coenzyme PQQ synthesis protein E. | 0.557 |
| PTO1013 | PTO1012 | PTO1013 | PTO1012 | Prephenate dehydratase. | Lactate 2-monooxygenase. | 0.615 |
| PTO1013 | PTO1014 | PTO1013 | PTO1014 | Prephenate dehydratase. | Coenzyme PQQ synthesis protein E. | 0.602 |
| PTO1014 | PTO1012 | PTO1014 | PTO1012 | Coenzyme PQQ synthesis protein E. | Lactate 2-monooxygenase. | 0.557 |
| PTO1014 | PTO1013 | PTO1014 | PTO1013 | Coenzyme PQQ synthesis protein E. | Prephenate dehydratase. | 0.602 |
| PTO1014 | PTO1314 | PTO1014 | PTO1314 | Coenzyme PQQ synthesis protein E. | Coenzyme PQQ synthesis protein E. | 0.664 |
| PTO1014 | PTO1435 | PTO1014 | PTO1435 | Coenzyme PQQ synthesis protein E. | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.457 |
| PTO1014 | ctaB1 | PTO1014 | PTO0720 | Coenzyme PQQ synthesis protein E. | Hypothetical cytochrome oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.900 |
| PTO1014 | ctaB2 | PTO1014 | PTO1307 | Coenzyme PQQ synthesis protein E. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.900 |
| PTO1014 | hemH | PTO1014 | PTO0948 | Coenzyme PQQ synthesis protein E. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.920 |
| PTO1314 | PTO1014 | PTO1314 | PTO1014 | Coenzyme PQQ synthesis protein E. | Coenzyme PQQ synthesis protein E. | 0.664 |
| PTO1435 | PTO1014 | PTO1435 | PTO1014 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Coenzyme PQQ synthesis protein E. | 0.457 |
| PTO1435 | hemH | PTO1435 | PTO0948 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.630 |
| ctaB1 | PTO1014 | PTO0720 | PTO1014 | Hypothetical cytochrome oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Coenzyme PQQ synthesis protein E. | 0.900 |
| ctaB1 | ctaB2 | PTO0720 | PTO1307 | Hypothetical cytochrome oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.916 |
| ctaB1 | hemH | PTO0720 | PTO0948 | Hypothetical cytochrome oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.937 |
| ctaB2 | PTO1014 | PTO1307 | PTO1014 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Coenzyme PQQ synthesis protein E. | 0.900 |
| ctaB2 | ctaB1 | PTO1307 | PTO0720 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Hypothetical cytochrome oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.916 |
| ctaB2 | hemH | PTO1307 | PTO0948 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.934 |
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