STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1025acyl-CoA dehydrogenase, short-chain specific. (314 aa)    
Predicted Functional Partners:
PTO1024
acyl-CoA dehydrogenase.
 
  
  0.962
PTO1023
3-ketoacyl-CoA thiolase.
  
 0.934
PTO1021
3-hydroxybutyryl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase.
  
 0.862
PTO1022
medium-chain-fatty-acid--CoA ligase.
 
 
 0.850
PTO0954
enoyl-CoA hydratase/isomerase family.
 
 0.841
PTO0281
Electron transfer flavoprotein beta-subunit.
 
 
 0.759
PTO0383
Beta-ketoacyl synthase; Thiolase.
 
 0.741
PTO1504
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.716
PTO0830
acyl-CoA dehydrogenase.
  
     0.685
PTO1026
2-keto-3-deoxy gluconate aldolase.
       0.671
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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