Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PTO1085Adenine deaminase. (573 aa)    
Predicted Functional Partners:
PTO1086
N-acyl-L-amino acid amidohydrolase.
 
    0.808
PTO1508
Hypothetical protein.
 
  
 0.643
PTO0152
ATPases of the PP-loop superamily.
 
  
  0.574
PTO1084
Sugar transporter.
       0.548
PTO0123
Purine nucleoside phosphorylase.
 
  
  0.537
PTO1120
Carbon monoxide dehydrogenase alpha subunit.
    
 0.535
PTO1121
Carbon monoxide dehydrogenase beta subunit.
    
 0.535
PTO1119
Carbon monoxide dehydrogenase, medium chain.
    
  0.532
PTO1087
Hypothetical protein.
       0.507
PTO0124
Hypothetical protein.
  
     0.431
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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