STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1111ABC transporter ATP-binding protein. (258 aa)    
Predicted Functional Partners:
PTO1112
ABC transporter ATP-binding protein.
 0.999
PTO1113
ABC transporter ATP-binding protein.
 
 0.999
PTO1527
Cysteine desulfurase.
  
  
 0.948
PTO1110
Transcriptional regulator PadR-like family.
  
  
 0.742
PTO0128
DNA polymerase delta catalytic subunit.
       0.679
PTO0507
Putative aromatic ring hydroxylating enzyme.
 
  
 0.620
PTO0456
Cell division cycle protein 48.
      
 0.467
PTO0347
Hypothetical protein DUF 74; Belongs to the UPF0145 family.
  
  
 0.436
PTO0096
ABC-type multidrug transport system, permease component.
    
 0.426
PTO0730
Daunorubicin resistance ATP-binding protein DrrB.
    
 0.426
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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