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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1165Glycosyltransferase. (355 aa)    
Predicted Functional Partners:
ef1b
Archaeal protein translation elongation factor 1 subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
  
    0.931
tgtA
Queunine/archaeosine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
   
 
 0.859
PTO1166
Phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family.
  
 
 0.818
PTO1163
Zinc finger protein.
       0.807
PTO0847
Tetratricopeptide repeat family protein.
 
 
 0.677
PTO0158
TPR-repeat-containing protein.
  
 
 0.614
PTO1142
Hypothetical protein.
  
 
 0.614
PTO1162
Transporter.
 
     0.605
PTO1138
Isomerizing glucosamine--fructose-6-phosphate aminotransferase.
 
 
 0.506
PTO0985
Hypothetical membrane protein; Involved in the biosynthesis of polysaccharides.
 
  
 0.454
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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