Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
PTO1187Hypothetical cytosolic protein. (147 aa)    
Predicted Functional Partners:
PTO1188
Beta-ketoacyl synthase; Thiolase.
 0.997
PTO0384
3-hydroxy-3-methylglutaryl-CoA-synthase/3- oxoacyl-[acyl-carrier-protein] synthase III; Belongs to the thiolase-like superfamily. UPF0219 family.
  
 0.961
PTO0383
Beta-ketoacyl synthase; Thiolase.
 
 0.891
PTO1189
isovaleryl-CoA dehydrogenase.
  
 
  0.806
PTO1023
3-ketoacyl-CoA thiolase.
  
 0.768
PTO1505
acetyl-CoA acetyltransferase.
  
 0.768
PTO1190
Hypothetical cytosolic protein.
       0.553
PTO1517
Hypothetical transcriptional regulator.
  
    0.497
PTO0382
Hypothetical protein DUF35.
  
     0.428
PTO0559
Sterol binding protein.
   
   0.417
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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