Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTO0531 | PTO1191 | PTO0531 | PTO1191 | Argininosuccinate lyase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.435 |
PTO0531 | PTO1363 | PTO0531 | PTO1363 | Argininosuccinate lyase. | Arginine deiminase. | 0.924 |
PTO0531 | pdaD | PTO0531 | PTO1192 | Argininosuccinate lyase. | Hypothetical protein; Belongs to the PdaD family. | 0.800 |
PTO0531 | speE | PTO0531 | PTO0613 | Argininosuccinate lyase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.539 |
PTO1191 | PTO0531 | PTO1191 | PTO0531 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Argininosuccinate lyase. | 0.435 |
PTO1191 | PTO1193 | PTO1191 | PTO1193 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Putative dehydrogenase. | 0.668 |
PTO1191 | PTO1194 | PTO1191 | PTO1194 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | ATP-dependent RNA helicase. | 0.491 |
PTO1191 | pdaD | PTO1191 | PTO1192 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein; Belongs to the PdaD family. | 0.957 |
PTO1193 | PTO1191 | PTO1193 | PTO1191 | Putative dehydrogenase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.668 |
PTO1193 | PTO1194 | PTO1193 | PTO1194 | Putative dehydrogenase. | ATP-dependent RNA helicase. | 0.560 |
PTO1193 | pdaD | PTO1193 | PTO1192 | Putative dehydrogenase. | Hypothetical protein; Belongs to the PdaD family. | 0.668 |
PTO1194 | PTO1191 | PTO1194 | PTO1191 | ATP-dependent RNA helicase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.491 |
PTO1194 | PTO1193 | PTO1194 | PTO1193 | ATP-dependent RNA helicase. | Putative dehydrogenase. | 0.560 |
PTO1194 | pdaD | PTO1194 | PTO1192 | ATP-dependent RNA helicase. | Hypothetical protein; Belongs to the PdaD family. | 0.491 |
PTO1363 | PTO0531 | PTO1363 | PTO0531 | Arginine deiminase. | Argininosuccinate lyase. | 0.924 |
PTO1363 | pdaD | PTO1363 | PTO1192 | Arginine deiminase. | Hypothetical protein; Belongs to the PdaD family. | 0.803 |
dys | pdaD | PTO1252 | PTO1192 | Putative deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Hypothetical protein; Belongs to the PdaD family. | 0.661 |
dys | speE | PTO1252 | PTO0613 | Putative deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.625 |
pdaD | PTO0531 | PTO1192 | PTO0531 | Hypothetical protein; Belongs to the PdaD family. | Argininosuccinate lyase. | 0.800 |
pdaD | PTO1191 | PTO1192 | PTO1191 | Hypothetical protein; Belongs to the PdaD family. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.957 |
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