Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTO1269Amino acid permease. (604 aa)    
Predicted Functional Partners:
PTO1270
Adenosylhomocysteinase; Belongs to the adenosylhomocysteinase family.
   
  0.717
PTO1495
Sugar ABC transporter extracellular solute binding protein.
  
     0.650
PTO1278
Transporter.
  
     0.627
PTO0552
Transporter.
  
     0.620
PTO0073
Transporter.
  
     0.617
PTO1267
Transporter.
 
   0.600
PTO1169
Transporter.
  
   0.583
PTO1529
Transporter, MMPL family.
  
     0.583
apgM
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.580
PTO1272
Hypothetical protein.
       0.580
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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