STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1304Cytochrome c oxidase polypeptide I/III; Belongs to the heme-copper respiratory oxidase family. (841 aa)    
Predicted Functional Partners:
PTO1306
Cytochrome c oxidase polypeptide II.
 
 0.999
PTO1134
Cytochrome b.
 
 0.998
ctaB2
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.997
ctaB1
Hypothetical cytochrome oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 0.990
PTO1133
Rieske iron-sulfur protein.
  
 0.988
PTO1400
NADH-quinone oxidoreductase chain A.
   
 0.988
PTO1404
NADH-quinone oxidoreductase chain H.
  
 
 0.984
PTO1409
NADH-quinone oxidoreductase chain N.
  
 
 0.980
PTO0929
NADH-quinone oxidoreductase chain M.
  
 
 0.968
PTO1028
NADH-quinone oxidoreductase chain M.
  
 
 0.967
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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