Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTO1329Fe-S oxidoreductase. (558 aa)    
Predicted Functional Partners:
PTO1327
Sodium-dependent phosphate transporter.
 
    0.821
nep1
Multicopy suppressor of ras1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA.
  
     0.668
PTO1328
Hypothetical exported protein.
       0.651
PTO1330
Acetyltransferase.
  
    0.582
PTO1326
Hypothetical membrane associated protein.
       0.555
PTO0956
Acetyltransferase.
  
     0.533
PTO1186
Molybdenum cofactor biosynthesis protein A.
  
   
 0.522
PTO0273
Hypothetical membrane spanning protein.
  
     0.519
adkA
Adenylate kinase; Belongs to the archaeal adenylate kinase family.
  
     0.515
PTO1325
Hypothetical membrane associated protein.
       0.508
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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