STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1344Permease. (383 aa)    
Predicted Functional Partners:
PTO1356
Diphosphomevalonate decarboxylase; Catalyzes the phosphorylation of mevalonate (MVA) to yield mevalonate-3-phosphate. Functions in an alternative mevalonate pathway, which passes through mevalonate 3-phosphate rather than mevalonate 5- phosphate. Also able to catalyze the formation of isobutene via the conversion of 3-hydroxyisovalerate (3-HIV) to an unstable 3-phosphate intermediate that undergoes a spontaneous decarboxylation.
  
     0.666
PTO0755
Putative DNA-binding protein.
  
     0.524
PTO0985
Hypothetical membrane protein; Involved in the biosynthesis of polysaccharides.
 
    0.517
atpC
A1AO H+ ATPase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
   0.509
PTO1350
Transporter.
  
     0.498
PTO1145
Putative multidrug resistance protein.
  
     0.496
PTO1345
ATP-dependent RNA helicase.
  
   0.495
PTO0806
Membrane metalloprotease.
  
     0.460
PTO0956
Acetyltransferase.
  
 
   0.438
PTO0127
Transporter.
  
     0.430
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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