Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTO1393Alpha glucoside ABC transporter permease protein. (277 aa)    
Predicted Functional Partners:
PTO1392
Alpha glucoside ABC transporter permease protein.
 
 0.997
PTO1390
Alpha glucoside ABC transporter solute binding protein.
 
 0.951
PTO1391
Alpha glucoside ABC transporter solute binding protein.
  
 0.921
PTO0089
glycerol-3-P ABC transporter permease protein.
 0.916
PTO1035
Sugar ABC transporter 1, permease protein.
 0.916
PTO0581
Maltose ABC transporter permease protein.
 
 0.915
PTO1088
Sugar binding protein.
 
 0.900
PTO0087
glycerol-3-P ABC transporter ATP binding protein.
 
  
 0.861
PTO1394
Alpha glucoside ABC transporter ATP-binding protein.
 
  
 0.855
PTO1494
Sugar ABC transporter fusion protein.
 
0.779
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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